Newcastle University

Publications

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• Popluechai S, Froissard M, Jolivet P, Breviario D, Gatehouse AMR, O'Donnell AG, Chardot T, Kohli A. Jatropha curcas oil body proteome and oleosins: L-form JcOle3 as a potential phylogenetic marker. Plant Physiology and Biochemistry 2011, 49(3), 352-356.
• Popluechai S, Froissard M, Jolivet P, Breviario D, Gatehouse AMR, O'Donnell AG, Chardot T, Kohli A. Jatropha curcas oil body proteome and oleosins: L-form JcOle3 as a potential phylogenetic marker. Plant Physiology and Biochemistry 2011, 49(3), 352-356.
• Bruno DW, VanWest P, Beakes GW. Saprolegnia and other oomycetes. In: Woo PTK; Bruno DW, ed. Fish Diseases and Disorders: Volume 3: Viral, Bacterial and Fungal Infections, 2nd Edition. Wallingford, Oxfordshire: CABI International, 2011, pp.669-720.
• Mao J, Wang JA, Dai HQ, Zhang ZD, Tang QY, Ren BA, Yang N, Goodfellow M, Zhang LX, Liu ZH. Yuhushiella deserti gen. nov., sp. nov., a new member of the suborder Pseudonocardineae. International Journal of Systematic and Evolutionary Microbiology 2011, 61, 621-630.
• Palmer CV, Bythell JC, Willis BL. A comparative study of phenoloxidase activity in diseased and bleached colonies of the coral Acropora millepora. Developmental & Comparative Immunology 2011, 35(10), 1098-1101.
• Gottardi EM, Krawczyk JM, von Suchodoletz H, Schadt S, Mühlenweg A, Uguru GC, Pelzer S, Fiedler H-P, Bibb MJ, Stach JEM, Süssmuth RD. Abyssomicin Biosynthesis: Formation of an unusual polyketide antibiotic - Feeding Studies and Genetic Analysis. ChemBioChem 2011, 12(9), 1401-1410.
• Bateson M, Desire S, Gartside SE, Wright GA. Agitated honeybees exhibit pessimistic cognitive biases. Current Biology 2011, 21(12), 1070-1073.
• Dadvand P, Rankin J, Rushton S, Pless-Mulloli T. Ambient air pollution and congenital heart disease: A register-based study. Environmental Research 2011, 111(3), 435-441.
• Wright GA. Appetitive Learning: Memories Need Calories. Current Biology 2011, 21(9), R301-R302.
• Chambers MA, Rogers F, Delahay RJ, Lesellier S, Ashford R, Dalley D, Gowtage S, Dave D, Palmer S, Brewer J, Crawshaw T, Clifton-Hadley R, Carter S, Cheeseman C, Hanks C, Murray A, Palphramand K, Pietravalle S, Smith GC, Tomlinson A, Walker NJ, Wilson GJ, Corner LAL, Rushton SP, Shirley MDF, Gettinby G, McDonald RA, Hewinson RG. Bacillus Calmette-Guerin vaccination reduces the severity and progression of tuberculosis in badgers. Proceedings of the Royal Society of London B: Biological Sciences 2011, 278(1713), 1913-1920.
• Sweet MJ, Croquer A, Bythell JC. Bacterial assemblages differ between compartments within the coral holobiont. Coral Reefs 2011, 30(1), 39-52.
• Nachtigall J, Schneider K, Bruntner C, Bull AT, Goodfellow M, Zinecker H, Imhoff JF, Nicholson G, Irran E, Sussmuth RD, Fiedler HP. Benzoxacystol, a benzoxazine-type enzyme inhibitor from the deep-sea strain Streptomyces sp NTK 935. Japanese Journal of Antibiotics 2011, 64(6), 453-457.
• Bythell JC, Wild C. Biology and ecology of coral mucus release. Journal of Experimental Marine Biology and Ecology 2011, 408(1-2), 88-93.
• Thomas MF, Sheppard CL, Guiver M, George RC, Simmister C, Cliff D, Gorton R, Elemraid MA, Clark JE, Rushton SP, Paton JY, Spencer DA. CHANGES IN PNEUMOCOCCAL SEROTYPE DISTRIBUTION OF PAEDIATRIC EMPYEMA IN THE AGE OF PNEUMOCOCCAL CONJUGATE VACCINES. In: British Thoracic Society Winter Meeting 2011. 2011, Westminster, London: BMJ Group.
• Rateb ME, Houssen WE, Arnold M, Abdelrahman MH, Deng H, Harrison WTA, Okoro CK, Asenjo JA, Andrews BA, Ferguson G, Bull AT, Goodfellow M, Ebel R, Jaspars M. Chaxamycins A-D, Bioactive Ansamycins from a Hyper-arid Desert Streptomyces sp. Journal of Natural Products 2011, 74(6), 1491-1499.
• Wild C, Hoegh-Guldberg O, Naumann M, Colombo-Pallotta MF, Fitt W, Ateweberhan M, Iglesias-Prieto R, Palmer C, Bythell JC, Ortiz JC, Loya Y, van Woesik R. Climate change impedes scleractinian corals as primary reef ecosystem engineers. Marine and Freshwater Research 2011. ,62 2 205-215.
• Thomas MF, Simmister C, Cliff D, Elemraid MA, Clark JE, Rushton SP, Gorton R, Paton JY, Spencer DA. Comparison of primary pleural drainage strategies in paediatric empyema. In: Thorax: Winter Meeting of the British Thoracic Society. 2011, Westminster: BMJ Group.
• Tétard-Jones C, Gatehouse AMR, Shotton PN, Rempelos L, Cooper J, Eyre M, Leifert C. Contrasting nutrient input and crop protection regimes lead to differences in the wheat leaf proteome. submitted, 2011. Submitted.
• Palmer CV, Traylor-Knowles NG, Willis BL, Bythell JC. Corals use similar immune cells and wound-healing processes as those of higher organisms. PLoS One 2011, 6(8), e23992.
• George DR, Collier R, Whitfield C, Port G. Could movement of neonates from non-host plants affect the potential of polyculture to reduce crop colonisation by pest insects?. Crop Protection 2011, 30(8), 1103-1105.
• Ceusters J, Borland AM, Godts C, Londers E, Croonenborghs S, Van Goethem D, De Proft MP. Crassulacean acid metabolism under severe light limitation: a matter of plasticity in the shadows?. Journal of Experimental Botany 2011, 62(1), 283-291.
• Peggie CT, Garratt CM, Whittingham MJ. Creating ephemeral resources: how long do the beneficial effects of grass cutting last for birds?. Bird Study 2011, 58(4), 390-398.
• Scarth JP, Clarke A, Teale P, Mill AC, Macarthur R, Kay J. Detection of endogenous steroid abuse in cattle: results from population studies in the UK. Food Additives & Contaminants: Part A: Chemistry, Analysis, Control, Exposure & Risk Assessment 2011, 28(1), 44-61.
• Scarth JP, Clarke A, Hands J, Teale P, Mill AC, Macarthur R, Kay J, De Brabander H. Detection of nandrolone and boldenone abuse in the ovine by GC-MS/MS. Chromatographia 2011, 73(11-12), 1155-1169.
• Kim BY, Kshetrimayum JD, Goodfellow M. Detection, selective isolation and characterisation of Dactylosporangium strains from diverse environmental samples. Systematic and Applied Microbiology 2011, 34(8), 606-616.
• Sweet MJ, Croquer A, Bythell JC. Development of bacterial biofilms on artificial corals in comparison to surface-associated microbes of hard corals. PLoS One 2011, 6(6), e21195.
• George DM, Rind FC, Bendall MW, Taylor MA, Gatehouse AMR. Developmental studies of transgenic maize expressing Cry1Ab on the African stem borer, Busseola fusca, effects on midgut cellular structure. Pest Management Science 2011, (epub ahead of print).
• George D, Babalola OO, Gatehouse AMR. Differential protein expression in maize (Zea mays) in response to insect attack. African Journal of Biotechnology 2011, 10(39), 7700-7709.
• McKenzie AJ, Vickery JA, Leifert C, Shotton P, Whittingham MJ. Disentangling the effects of fertilisers and pesticides on winter stubble use by farmland birds. Basic and Applied Ecology 2011, 12(1), 80-88.
• Rateb ME, Houssen WE, Harrison WTA, Deng H, Okoro CK, Asenjo JA, Andrews BA, Bull AT, Goodfellow M, Ebel R, Jaspars M. Diverse Metabolic Profiles of a Streptomyces Strain Isolated from a Hyper-arid Environment. Journal of Natural Products 2011, 74(9), 1965-1971.
• Sweet MJ, Croquer A, Bythell JC. Dynamics of bacterial community development in the reef coral Acropora muricata following experimental antibiotic treatment. Coral Reefs 2011, 30(4), 1121-1133.
• Vale L, Adamson A, Critchley J, Rushton S, Kelly S, Shen J, Shirley M, Mason H, Donaldson C, Armstrong N. Economic evaluation: evaluating the short-term impacts of the school food policy and experimental modelling of longer term impacts. London: Newcastle University and the University of Stirling as part of the Public Health Research Consortium, 2011. B5-07A.
• Antony-Babu S, Singleton I. Effects of ozone exposure on the xerophilic fungus, Eurotium amstelodami IS-SAB-01, isolated from naan bread. International Journal of Food Microbiology 2011, 144(3), 331-336.
• Kim BY, Willbold S, Kulik A, Helaly SE, Zinecker H, Wiese J, Imhoff JF, Goodfellow M, Sussmuth RD, Fiedler HP. Elaiomycins B and C, novel alkylhydrazides produced by Streptomyces sp BK 190. Journal of Antibiotics 2011, 64(8), 595-597.
• Toet S, Ineson P, Peacock S, Ashmore M. Elevated ozone reduces methane emissions from peatland mesocosms. Global Change Biology 2011, 17(1), 288-296.
• Spencer DA, Thomas MF, Sheppard CL, Guiver M, George RC, Gorton R, Paton JY, Simmister C, Cliff D, Elemraid MA, Clark JE, Rushton SP. Emergence of pneumococcal serotype 19A as a cause of severe complicated pneumonia with empyema in children in England. In: Thorax: Winter Meeting of the British Thoracic Society. 2011, Westminster: BMJ Group.
• Wyness K, Mills G, Jones L, Barnes JD, Jones DL. Enhanced nitrogen deposition exacerbates the negative effect of increasing background ozone in Dactylis glomerata, but not Ranunculus acris. Environmental Pollution 2011, 159(10), 2493-2499.
• Tosh CR, Ruxton GD, Krause J, Franks DW. Experiments with humans indicate that decision accuracy drives the evolution of niche width. Proceedings of the Royal Society of London, Series B: Biological Sciences 2011, 278(1724), 3504-3509.
• Luiz OJ, Edwards AJ. Extinction of a shark population in the Archipelago of Saint Paul's Rocks (equatorial Atlantic) inferred from the historical record. Biological Conservation 2011, 144(12), 2873-2881.
• Garratt CM, Hughes M, Eagle G, Fowler T, Grice PV, Whittingham MJ. Foraging habitat selection by breeding Common Kestrels Falco tinnunculus on lowland farmland in England. Bird Study 2011, 58(1), 90-98.
• Roh H, Uguru GC, Ko HJ, Kim S, Kim B-Y, Goodfellow M, Bull AT, Kim KH, Bibb MJ, Choi IG, Stach JEM. Genome Sequence of the Abyssomicin and Proximicin-Producing Marine Actinomycete Verrucosispora maris AB-18-032. Journal of Bacteriology 2011, 193(13), 3391-3392.
• Thomas MF, Blain AP, Shirley MDF, Simmister C, Elemraid MA, Gorton R, Pearce MS, Clark JE, Rushton SP, Spencer DA. Geographical variation in the risk of childhood pneumonia and relationships to socio-economic and health deprivation. In: European Respiratory Society Annual Congress. 2011, Amsterdam, The Netherlands.
• Guest JR, Dizon RM, Edwards AJ, Franco C, Gomez ED. How quickly do fragments of coral ‘self-attach’ after transplantation?. Restoration Ecology 2011, 19(2), 234-242.
• Kenward RE, Whittingham MJ, Arampatzis S, Manos BD, Hahn T, Terry A, Simoncini R, Alcorn J, Bastian O, Donlan M, Elowe K, Franzen F, Karacsonyi Z, Larsson M, Manou D, Navodaru I, Papadopoulou O, Papathanasiou J, von Raggamby A, Sharp RJA, Soderqvist T, Soutukorva A, Vavrova L, Aebischer NJ, Leader-Williams N, Rutz C. Identifying governance strategies that effectively support ecosystem services, resource sustainability, and biodiversity. Proceedings of the National Academy of Sciences of the United States of America 2011, 108(13), 5308-5312.
• Elemraid MA, Eastham KM, Rushton SP, Shirley MDF, Spencer DA, Thomas MF, Hampton F, Gorton R, Pollard K, Gennery AR, Clark JE. Impact of heptavalent pneumococcal conjugate vaccine on the incidence of childhood pneumonia seen in hospital in the North East of England. In: Thorax: Winter Meeting of the British Thoracic Society. 2011, Westminster: BMJ Group.
• Coulthard SA, Redfern CPF, Vikingsson S, Lindqvist-Appell M, Skoglund K, Jakobsen-Falk I, Hall AG, Taylor GA, Hogarth LA. Increased Sensitivity to Thiopurines in Methylthioadenosine Phosphorylase-Deleted Cancers. Molecular Cancer Therapeutics 2011, 10(3), 495-504.
• Jorgensen F, Ellis-Iversen FJ, Rushton S, Bull S, Harris SA, Bryan SJ, Gonzalez A, Humphrey TJ. Influence of Season and Geography on Campylobacter jejuni and C. coli Subtypes in Housed Broiler Flocks Reared in Great Britain. Applied and Environmental Microbiology 2011, 77(11), 3741-3748.
• Gatehouse AMR, Ferry N, Edwards MG, Bell HA. Insect-resistant biotech crops and their impacts on beneficial arthropods. Philosophical Transactions of the Royal Society B: Biological Sciences 2011, 366(1569), 1438-1452.
• Xie QY, Wang C, Wang R, Qu Z, Lin HP, Goodfellow M, Hong K. Jishengella endophytica gen. nov., sp nov., a new member of the family Micromonosporaceae. International Journal of Systematic and Evolutionary Microbiology 2011, 61, 1153-1159.
• Lagisz M, Port G, Wolff K. Living in a jar: genetic variation and differentiation among laboratory strains of the red flour beetle. Journal of Applied Entomology 2011, 135(9), 682-692.
• Tzortzakis N, Taybi T, Roberts R, Singleton I, Borland A, Barnes J. Low-level atmospheric ozone enrichment induces latent protection against Botrytis cinerea in tomato. Postharvest Biology and Technology 2011, 61(2-3), 152.
• Tzortzakis N, Taybi T, Roberts R, Singleton I, Borland A, Barnes J. Low-level atmospheric ozone exposure induces protection against Botrytis cinerea with down-regulation of ethylene-, jasmonate- and pathogenesis-related genes in tomato fruit. Postharvest Biology and Technology 2011, 61(2-3), 152-159.
• Richards SA, Whittingham MJ, Stephens PA. Model selection and model averaging in behavioural ecology: the utility of the IT-AIC framework. Behavioral Ecology and Sociobiology 2011, 65(1), 77-89.
• Ferry N, Stavroulakis S, Guan WZ, Davison GM, Bell HA, Weaver RJ, Down RE, Gatehouse JA, Gatehouse AMR. Molecular interactions between wheat and cereal aphid (Sitobion avenae): Analysis of changes to the wheat proteome. Proteomics 2011, 11(10), 1985-2002.
• Kopp KC, Wolff K, Jokela J. Natural range expansion and human-assisted introduction leave different genetic signatures in a hermaphroditic freshwater snail. Evolutionary Ecology 2011, (epub ahead of print).
• Sharma A, Barron J, Le Couteur J, Grunze H, Kelly T, Ferrier I, Close A, Rushton S, Le Couteur A. Neurocognitive function in children of adults with bipolar disorder: a UK study. In: Bipolar Disorders: 9th International Conference on Bipolar Disorder. 2011, Pittsburgh, Pennsylvania, USA: Wiley-Blackwell Publishing, Inc.
• Sato S, Beakes G, Idei M, Nagumo T, Mann DG. Novel Sex Cells and Evidence for Sex Pheromones in Diatoms. PLoS One 2011, 6(10), e26923.
• Armstrong JL, Corazzari M, Martin S, Pagliarini V, Falasca L, Hill DS, Ellis N, Al Sabah S, Redfern CPF, Fimia GM, Piacentini M, Lovat PE. Oncogenic B-RAF Signaling in Melanoma Impairs the Therapeutic Advantage of Autophagy Inhibition. Clinical Cancer Research 2011, 17(8), 2216-2226.
• Carr-Wilkinson J, Griffiths R, Elston R, Goranov B, Redfern CPF, Gamble LD, Lunec J, Tweddle DA. Outcome of the p53-mediated DNA damage response in neuroblastoma is determined by morphological subtype and MYCN expression. Cell Cycle 2011, 10(21), 3778-3787.
• Mill AC, Rushton SP, Murrary AWA, Rose M. PAH contamination in Shellfish: Modelling to estimate exposure. Ecotoxicology 2011, 21(2), 393-408.
• Ashforth EJ, Olive PJW, Ward AC. Phylogenetic characterisation of bacterial assemblages and the role of sulphur-cycle bacteria in an Arenicola marina bioturbated mesocosm. Marine Ecology - Progress Series 2011, 439, 19-30.
• Mallari NAD, Collar NJ, Lee DC, McGowan PJK, Wilkinson R, Marsden SJ. Population densities of understorey birds across a habitat gradient in Palawan, Philippines: implications for conservation. Oryx 2011, 45(2), 234-242.
• Raorane M, Popluechai S, Gatehouse AMR, Kohli A. Proteomics perspectives on understanding and improving Jatropha curcas. In: Bahadur, B., Mulpuri, S, ed. Compendium of Bioenergy Plants: Jatropha. New Hampshire,USA: Science Publishers, 2011, pp.101-108.
• Nicholson L, Evans C, Matheson EC, Minto L, Keilty C, Schwab C, Harrison CJ, Hall AG, Redfern C, Whetton A, Irving J. Quantitative Proteomic Analysis Reveals Maturation As a Mechanism Underlying Glucocorticoid Resistance in Childhood Acute Lymphoblastic Leukemia and PAX5 As a Re-Sensitising Therapeutic Target. In: Blood: 53rd Annual Meeting and Exposition of the American Society of Hematology (ASH). 2011, San Diego, California, USA: American Society of Hematology.
• Labeda DP, Goodfellow M, Chun J, Zhi XY, Li WJ. Reassessment of the systematics of the suborder Pseudonocardineae: transfer of the genera within the family Actinosynnemataceae Labeda and Kroppenstedt 2000 emend. Zhi et al. 2009 into an emended family Pseudonocardiaceae Embley et al. 1989 emend. Zhi et al. 2009. International Journal of Systematic and Evolutionary Microbiology 2011, 61(6), 1259-1264.
• Kim BY, Brown R, Labeda DP, Goodfellow M. Reclassification of 'Dactylosporangium variesporum' as Saccharothrix variisporea corrig. (ex Tomita et al. 1977) sp. nov., nom. rev. International Journal of Systematic and Evolutionary Microbiology 2011, 61, 310-314.
• Romeis J, Hellmich RL, Candolfi MP, Carstens K, De Schrjijver A, Gatehouse AMR, Herman RA, Huesing JE, McLean MA, Raybould A, Shelton AM, Waggoner A. Recommendations for the design of laboratory studies on non-target arthropods for risk assessment of genetically engineered plants. Transgenic Research 2011, 20(1), 1-22.
• Mumby PJ, Iglesias-Prieto R, Hooten AJ, Sale PF, Hoegh-Guldberg O, Edwards AJ, Harvell CD, Gomez ED, Knowlton N, Hatziolos ME, Kyewalyanga MS, Muthiga N. Revisiting climate thresholds and ecosystem collapse. Frontiers in Ecology and the Environment 2011, 9(2), 94-96.
• Sweet MJ, Singleton I. Silver Nanoparticles: A Microbial Perspective. In: Laskin AI; Sariaslani S; Gadd GM, ed. Advances in Applied Microbiology 2011. Burlington: Elsevier Inc, 2011, pp.115-133.
• Gomaa MS, Bridgens CE, Aboraia AS, Veal GJ, Redfern CPF, Brancale A, Armstrong JL, Simons C. Small Molecule Inhibitors of Retinoic Acid 4-Hydroxylase (CYP26): Synthesis and Biological Evaluation of Imidazole Methyl 3-(4-(aryl-2-ylamino)phenyl)propanoates. Journal of Medicinal Chemistry 2011, 54(8), 2778-2791.
• McNally R, Gomez-Pozo B, Blakey K, James P, Pearce M, Craft A, Rushton S. Socioeconomic diversity and the incidence of childhood leukaemia in Northern England. In: Pediatric Blood & Cancer: 43rd Congress of the International Society of Paediatric Oncology (SIOP). 2011, Auckland, New Zealand: John Wiley & Sons, Inc.
• Sazak A, Sahin N, Guven K, Isik K, Goodfellow M. Streptomyces samsunensis sp nov., a member of the Streptomyces violaceusniger clade isolated from the rhizosphere of Robinia pseudoacacia. International Journal of Systematic and Evolutionary Microbiology 2011, 61(6), 1309-1314.
• Hozzein WN, Ali MIA, Hammouda O, Mousa AS, Goodfellow M. Streptomyces sannurensis sp nov., a new alkaliphilic member of the genus Streptomyces isolated from Wadi Sannur in Egypt. African Journal of Microbiology Research 2011, 5(11), 1329-1334.
• Larpin-Laborde S, Imran M, Bonaiti C, Bora N, Gelsomino R, Goerges S, Irlinger F, Goodfellow M, Ward AC, Vancanneyt M, Swings J, Scherer S, Gueguen M, Desmasures N. Surface microbial consortia from Livarot, a French smear-ripened cheese. Canadian Journal of Microbiology 2011, 57(8), 651-660.
• Gomaa MS, Bridgens CE, Veal GJ, Redfern CPF, Brancale A, Armstrong JL, Simons C. Synthesis and Biological Evaluation of 3-(1H-Imidazol- and Triazol-1-yl)-2,2-dimethyl-3-[4-(naphthalen-2-ylamino)phenyl]propyl Derivatives as Small Molecule Inhibitors of Retinoic Acid 4-Hydroxylase (CYP26). Journal of Medicinal Chemistry 2011, 54(19), 6803-6811.
• Uguru GC, Mondhe M, Goh S, Bibb MJ, Good L, Stach JEM. Synthetic RNA silencing in Streptomyces coelicolor. Microbial Biotechnology 2011. In Preparation.
• Rind FC, Birkett CL, Duncan BJA, Ranken AJ. Tarantulas cling to smooth vertical surfaces by secreting silk from their feet. Journal of Experimental Biology 2011, 214(11), 1874-1879.
• Simmons PJ. The effects of temperature on signalling in ocellar neurons of the Desert locust, Schistocerca gregaria. Journal of Comparative Physiology A 2011, 197(11), 1083-1096.
• Simmons PJ. The effects of temperature on signalling in ocellar neurons of the desert locust, Schistocerca gregaria. Journal of Comparative Physiology A 2011, 197(11), 1083-1096.
• Beakes GW, Glockling SL, Sekimoto S. The evolutionary phylogeny of the oomycete "fungi". Protoplasma 2011, 249(1), 3-19.
• Whittingham MJ. The future of agri-environment schemes: biodiversity gains and ecosystem service delivery?. Journal of Applied Ecology 2011, 48(3), 509-513.
• Borland AM, Zambrano VAB, Ceusters J, Shorrock K. The photosynthetic plasticity of crassulacean acid metabolism: an evolutionary innovation for sustainable productivity in a changing world. New Phytologist 2011, 191(3), 619-633.
• Rolfe MD, TerBeek A, Graham AI, Trotter EW, Asif HMS, Sanguinetti G, deMattos JT, Poole RK, Green J. Transcript Profiling and Inference of Escherichia coli K-12 ArcA Activity across the Range of Physiologically Relevant Oxygen Concentrations. Journal of Biological Chemistry 2011, 286(12), 10147-10154.
• Elemraid MA, Pollard K, Thomas MF, Gennery AR, Eastham KM, Rushton SP, Hampton F, Singleton P, Gorton R, Spencer DA, Clark JE, NE England Paediatric Resp Infect. Validity of using Hospital Episode Statistics data on monitoring disease trends. Thorax 2011, 66(9), 827.
• Tosh CR. Which conditions promote negative density dependent selection on prey aggregations?. Journal of Theoretical Biology 2011, 281(1), 24-30.