Module Catalogue 2024/25

BGM2057 : Medical genomics: from DNA to disease

BGM2057 : Medical genomics: from DNA to disease

  • Offered for Year: 2024/25
  • Module Leader(s): Dr Joanna Elson
  • Lecturer: Dr Mauro Santibanez Koref, Professor Heather Cordell, Dr Simon Bamforth, Dr Katarzyna Pirog, Dr Louise Reynard, Dr Michael Jackson, Professor John Sayer, Dr Catherine Meplan, Professor Lyle Armstrong
  • Owning School: Biomedical, Nutritional and Sports Scien
  • Teaching Location: Newcastle City Campus
Semesters

Your programme is made up of credits, the total differs on programme to programme.

Semester 2 Credit Value: 20
ECTS Credits: 10.0
European Credit Transfer System
Pre-requisite

Modules you must have done previously to study this module

Pre Requisite Comment

N/A

Co-Requisite

Modules you need to take at the same time

Co Requisite Comment

None.

Aims

1) To describe in detail, the organisation of the human genome, including an overview of human variation and major projects investigating it.
2) To consider mechanisms for regulating gene expression and experimental approaches for studying gene expression.
3) To provide an overview of model organisms used in biomedical research and to consider approaches used to generate mouse models.
4) To consider different approaches for identifying genes underlying human genetic disorder and characterizing their functions.

Outline Of Syllabus

This module moves from describing the organisation of the human genome, through gene regulation and expression to methods and approaches for identifying genes involved in human genetic disorder and characterising their functions.

The module syllabus will contain:

-a detailed description of the organisation of the human genome and an introduction to how this influences mutation, variation, and function

-exploration of regulatory mechanisms controlling gene expression and approaches to studying expression patterns

-an overview of model organisms and classical and recent approaches for generating mouse models

-approaches for studying human genetic disorders will be discussed, covering some of the methods used to identify the underlying causative genes and what is known of gene function

Learning Outcomes

Intended Knowledge Outcomes

By the end of the module the student will be able to:
1) describe the main features of the human genome
2) differentiate amongst at least three methodologies for generating mouse models
3) describe, with examples, at least three mechanisms regulating gene expression
4) discuss approaches to studying gene expression patterns
5) explain, with examples. approaches used to identify human disease genes.

Intended Skill Outcomes

By the end of the module students will be able to:

1) plan and critically analyse recent research literature relating to specific research topics
2) analyse genetic information using in silico databases and genome browsers

Teaching Methods

Teaching Activities
Category Activity Number Length Student Hours Comment
Guided Independent StudyAssessment preparation and completion155:0055:00Preparation for in-course assessment and exams
Scheduled Learning And Teaching ActivitiesLecture181:0018:00In person - Used as primary method of knowledge transfer. Further reading and self-directed learning given
Guided Independent StudyAssessment preparation and completion24:008:00Students will prepare for practicals using references & online material provided by pract leaders
Scheduled Learning And Teaching ActivitiesPractical23:006:00In person - Computer based practicals
Scheduled Learning And Teaching ActivitiesSmall group teaching11:001:00In person - workshop: how to write answer PIE-style questions
Scheduled Learning And Teaching ActivitiesSmall group teaching11:001:00In person - seminar/debate on genetic testing, 23 and me & ethical implications of genomic medicine
Scheduled Learning And Teaching ActivitiesSmall group teaching11:001:00In person - An assessment feedback and revision session before the exam
Scheduled Learning And Teaching ActivitiesSmall group teaching11:001:00In person - how to write an essay & how to research prior to final assessment. Support for the timed essay
Guided Independent StudyIndependent study1109:00109:00Writing notes and reflecting on lectures based on text books and Recap
Total200:00
Teaching Rationale And Relationship

Lectures will provide the majority if the knowledge base. The lectures should stimulate the students to reflect and read further from textbooks and references highlighted during the lectures. The lectures will include links to papers, videos and books to aid self-directed study.

The seminar will support the students in developing skills for writing timed essays. The practicals enable the students to navigate online resources and synthesise and apply the knowledge gained.

Reading Lists

Assessment Methods

The format of resits will be determined by the Board of Examiners

Exams
Description Length Semester When Set Percentage Comment
Written Examination302A20In person Inspera invigilated MCQ (30 Mins) (20%) max 50 questions
Written Examination902A50Part 2 written essays exams to be scheduled together. (Inspera to be open for the duration of the examination (120 mins)
Other Assessment
Description Semester When Set Percentage Comment
Essay2M30In person invigilated timed essay based on 2-3 papers given a month prior to the essay plus PIE style SAQ on one of the papers - 1.5 hour in length, max 5 questions
Assessment Rationale And Relationship

The examination provides evidence of knowledge and understanding of the topic.

The timed essay tests application of knowledge, understanding and critical evaluation skills.

The computer-based practicals promote understanding, ability to navigate online resources and helps to synthesise and apply the knowledge gained.

Timetable

Past Exam Papers

General Notes

Original Handbook text:

Welcome to Newcastle University Module Catalogue

This is where you will be able to find all key information about modules on your programme of study. It will help you make an informed decision on the options available to you within your programme.

You may have some queries about the modules available to you. Your school office will be able to signpost you to someone who will support you with any queries.

Disclaimer

The information contained within the Module Catalogue relates to the 2024 academic year.

In accordance with University Terms and Conditions, the University makes all reasonable efforts to deliver the modules as described.

Modules may be amended on an annual basis to take account of changing staff expertise, developments in the discipline, the requirements of external bodies and partners, and student feedback. Module information for the 2025/26 entry will be published here in early-April 2025. Queries about information in the Module Catalogue should in the first instance be addressed to your School Office.