The PIVI facility is equipped with a high performance and resolution in vivo micro-CT system.
The SkyScan 1176 scanner provides an ideal anatomical imaging modality for non-invasive visualisation of lung, fat and bone, without the need for CT contrast agents. With its extra-large imaging bore and long axial field of view, the 1176 model offers excellent flexibility to image a wide range of subjects.
In material sciences, the 1176 system has provided engineering groups with a non-destructive method to investigate shape, porosity, density and other characteristics
Animal monitoring
The physiological monitoring sub-system includes video monitoring of an animal with real-time movement detection, ECG and breathing detection, and temperature stabilization.
The Varian 7 Tesla (T) is based in our Preclinical Magnetic Resonance Imaging (MRI) Facility, located at the Health Innovation Neighbourhood. It has a 31cm horizontal bore system, with a Varian Direct Drive console and 4 receiver channels.
One of the main advantages of MRI is its capability of producing highly detailed images of soft tissues. MRI is an extremely versatile imaging modality that can be utilised to collect dynamic, functional and metabolic information in vivo.
MRI techniques
The 7T MRI scanner offers a broad range of imaging and spectroscopy techniques including:
blood flow and blood oxygen measurements (BOLD EPI methods)
The 7T MRI is equipped with a range of specialised coils for pre-clinical imaging including:
72mm, 39mm and 30mm i.d. quadrature birdcage coils for whole body imaging
dedicated brain imaging coil
31P surface coil
19F surface coil
13C surface coil
Potential applications of MRI
Oncology
Tumour growth
Response to treatment
Cell tracking
Development of MRI contrast agents
Neuroscience and neurodegenerative disorders
Pharmaceuticals
Drug discovery
Pharmokinetics (PK)
Absorption, distribution, metabolism and excretion (ADME)
Infectious and inflamatory diseases
Cardiology
Musculoskeletal disorders
Metabolic studies
Animal monitoring
The MRI is completed with a small animal (SA) instrument which allows image gating.
Additionally, the system can simultaneously monitor and record ECG, respiration and blood pressure. Animals are heated by air with a heater system. Temperature is monitored using a fibre-optic thermometry system.
Funded by the Wellcome Trust, this 3D optical imaging system allows non-invasive and real-time longitudinal monitoring of disease progression, cell trafficking, and gene expression patterns. The system is capable of both luminescence and fluorescence modes of imaging.
Real-time in vivo imaging
The IVIS can image bioluminescence and fluorescence in up to 5 mice during a single scanning session. Images can be used to generate high quality 3D quantitative representations of bioluminescence and fluorescence (400–840 nm) in vivo and in real time.
The IVIS software allows for easy switching between fluorescence and bioluminescence modes and facilitates in vivo spectral unmixing of fluorescent probes.
The system also incorporates a topographic laser scanner, and can yield for single-view, diffuse tomographic reconstructions of internal sources.
IVIS techniques
Bioluminescent
Spectral un-mixing
Fluorescence, including epi-illumination and trans-illumination
3D diffuse tomographic, including Fluorescent Imaging Tomography (FLIT) and Diffuse Luminescence Imaging Tomography (DLIT)
Potential applications of IVIS
Functional genomics
Expression profiles and regulation study
Protein–protein interaction
Apoptosis study
Oncology
Tumour growth and metastasis
Tumour related gene study
Infectious disease
Infectious pathway
Molecular study
Stem cell research
Tracking and functional analysis
Phamaceuticals
Drug discovery (high throughput)
Pharmacokinetics (PK)
Absorption, distribution, metabolism and excretion (ADME)
Toxicology research
Pharmaceutical toxicology
Chemical toxicology
Gene delivery and therapy
Expression kinetics and localisation
Animal monitoring
IVIS is equipped with an Isoflurane anaesthesia system providing accurate flows of 0.5 and 1.0 L/min of gas (O2).
IVIS stage temperature can be monitored where the subjects are placed.
Centre for Translational Systems Neuroscience (CTSN)
The pre-clinical Centre for Translational Systems Neuroscience (CTSN) facility houses a Bruker 4.7 Tesla (T), 38 cm bore. This is ideally suited for vertical/upright scanning of behaving NHPs.
This scanner is a part of an international initiative working towards NHP MRI open data (PRIME-DE: Milham et al., Neuron, 2018; Milham, Petkov et al., Neuron 2020). We are a key site providing high-quality and high-resolution structural and functional MRI data in behaving NHPs as an indispensable translational model for understanding the human brain in health and disease. The scanner has also supported contracts, such as for scanning soft tissue at high resolution, and national and international collaborations.
MRI is an extremely versatile imaging modality that can be utilised to collect dynamic, functional and metabolic information in vivo. The 4.7T and 7T pre-clinical systems are also currently being developed for smaller NHP scanning, in collaboration with University of Cambridge.
MRI techniques
The 4.7T MRI scanner offers a broad range of imaging techniques including:
The PIVI facility benefits from a clinical grade Shear Wave Elastography (SWE) system.
SWE is a medical imaging technique used in ultrasound to assess the stiffness or elasticity of tissues. This non-invasive method provides valuable information about tissue characteristics and is particularly useful in the evaluation of liver fibrosis and other soft tissue abnormalities.
Shear Wave Elastography (SWE)
Tissue elasticity
Doppler / Colour imaging
Fluid motion – velocity & direction
2D B-mode anatomical imaging
Structural measurement
Services
Using our cutting-edge equipment, we are able to provide a full service for our customers, including:
Advice on experimental planning
Image acquisition
Data analysis
Thanks to the team at the Newcastle Preclinical In Vivo Imaging Facility we can now add microCT to our repertoire of tools for post-mortem forensic investigation. The images that this technique produce can provide easily understood documentation of important findings that can be used to help us assist the police with their enquiries.
We are keen for individuals to access much of our equipment themselves, and can provide the training necessary to gain the required levels of competence and confidence for this to happen. The level of training required varies between each imaging modality and the type of work being performed.
A general introduction to the facility and its equipment is also provided to anyone requiring access, and covers all relevant safety and access procedures.